Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSE---VVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRL-PLARVRLVEVGGDVQLDSVRIF
2XG3 Chain:A ((4-132))
---VPYNLPLPGGVVPRMLITILGTVKPNANRIALDF----QRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTS----
General information:
TITO was launched using:
RESULT:
Template:
2XG3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64754 for 906 contacts (-71.5/contact) +
2D Compatibility (PS) -13388 + (NN) -6348 + (LL) 892
1D Compatibility (HY) -12000 + (ID) 2400
Total energy: -97998.0 ( -108.17 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_2XG3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XG3-query.scw
PDB file :
Tito_Scwrl_2XG3.pdb
: