Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFADGRLKMHENA--AWLDGQRLPPQGYAADE
4EW2 Chain:A ((3-200))
--VAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLS-RVKLAEHKIFPAALQLVASGTVQLGENGKICWV--------------
General information:
TITO was launched using:
RESULT:
Template:
4EW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145243 for 1552 contacts (-93.6/contact) +
2D Compatibility (PS) -21879 + (NN) -13085 + (LL) 496
1D Compatibility (HY) -18000 + (ID) 4150
Total energy: -201861.0 ( -130.07 by residue)
QMean score : 0.745
(partial model without unconserved sides chains):
PDB file :
Tito_4EW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EW2-query.scw
PDB file :
Tito_Scwrl_4EW2.pdb
: