Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYES
3MLA Chain:B ((3-191))
MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPP-----NITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYES
General information:
TITO was launched using:
RESULT:
Template:
3MLA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160848 for 1425 contacts (-112.9/contact) +
2D Compatibility (PS) -20489 + (NN) -13703 + (LL) 156
1D Compatibility (HY) -30000 + (ID) 9200
Total energy: -234084.0 ( -164.27 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_3MLA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MLA-query.scw
PDB file :
Tito_Scwrl_3MLA.pdb
: