Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVEPETTPTPNPPPAEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
1WKW Chain:A ((1-191))
--------------------------EVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
General information:
TITO was launched using:
RESULT:
Template:
1WKW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81511 for 1406 contacts (-58.0/contact) +
2D Compatibility (PS) -20223 + (NN) -9978 + (LL) 728
1D Compatibility (HY) -26800 + (ID) 9500
Total energy: -147284.0 ( -104.75 by residue)
QMean score : 0.704
(partial model without unconserved sides chains):
PDB file :
Tito_1WKW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WKW-query.scw
PDB file :
Tito_Scwrl_1WKW.pdb
: