Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPPKRSCPSFSASSEGTRIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLSTL
2ZI9 Chain:A ((38-279))
------------------TRIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSNVQSTQDEFEELTMSQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYASLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
2ZI9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112167 for 1811 contacts (-61.9/contact) +
2D Compatibility (PS) -25754 + (NN) -7738 + (LL) 272
1D Compatibility (HY) -34400 + (ID) 11800
Total energy: -191587.0 ( -105.79 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_2ZI9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZI9-query.scw
PDB file :
Tito_Scwrl_2ZI9.pdb
: