Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVENVDNVSFALNGRADEWCMSVETRLDSLVREKSEVKAYVGGCPSVITDAGAYDALFDMRRRWSNNGGFPLRMLEESSSEVTSSSALGLPPAMVMSPESLASPEYRALELWSYDDGITYNTAQSLLGACNMQQQQLQPQQPHPAPPTLPTMPLPMPPTTPKSENESMSSGREELSPASSINGCSADADARRQKKGPAPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKNAVYICKFGHACEMDMYMRRKCQECRLKKCLAVGMRPECVIQEPSKNKDRQRQKKDKGILLPVSTTTVEDHMPPIMQCDPPPPEAARIHEVVPRYLSEKLMEQNRQKNIPPLSANQKSLIARLVWYQEGYEQPSDEDLKRVTQTWQSDEEDEESDLPFRQITEMTILTVQLIVEFAKGLPGFSKISQSDQITLLKASSSEVMMLRVARRYDAASDSVLFANNKAYTRDNYRQGGMAY-VIEDLLHFCRCMFAMGMDNVHFALLTAIVIFS-DRPGLEQPSLVEEIQRYYLNTLRIYIINQNSASSRCAVIYGRILSVLTELRTLGTQNSNMCISLKLKNRKLPPFLEEIWDVAEVATTHPTVLPPTNPVVL
5AVL Chain:A ((40-283))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PQLSPEQLGMIEKLVAAQQ------------VT-PW--REARQQR---FAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDR---LMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE-----------------


General information:
TITO was launched using:
RESULT:

Template: 5AVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151591 for 1653 contacts (-91.7/contact) +
2D Compatibility (PS) -23856 + (NN) -9643 + (LL) 20756
1D Compatibility (HY) -22800 + (ID) 4550
Total energy: -191684.0 ( -115.96 by residue)
QMean score : 0.431

(partial model without unconserved sides chains):
PDB file : Tito_5AVL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AVL-query.scw
PDB file : Tito_Scwrl_5AVL.pdb: