Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLPPQLSFGLYVAAFALGFPLNVLAIRGATAHARLRLTPSLVYALNLGCSDLLLTVSLPLKAVEALASGAWPLPASLCPVFAVAHFFPLYAGGGFLAALSAGRYLGAAFPLGYQAFRRPC---YSWGVCAAIWALVLCHLGLVFGLEAPGGWLDHSNTSLGINTPVNGSPVCLEAWDPASAG-PARFSLSLLL--FFLPLAITAFCYVGCLRALARSGLTHRRKLRAAWVAGGALLTLLLCVGPYNASNVASFLYPNLGGSWRKLGLITGAWSVVLNPLVTGYLGRGPGLKTVCAARTQGGKSQK |
| 4XT1 Chain:A ((43-255)) | ------VTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGD-VYFINLAAADLLFVCTLPLWMQYLLD-------SVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY-MRYRPVKQACLFSIFWWIFAVIIAIP--HFMVV----------------------TKKDNQCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQ--SRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHC |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128433 for 1321 contacts (-97.2/contact) +
2D Compatibility (PS) -20740 + (NN) -6905 + (LL) 796
1D Compatibility (HY) -25600 + (ID) 2650
Total energy: -183532.0 ( -138.93 by residue)
QMean score : 0.154
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