Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWNATPSEEPGFNLTLADLDWDASPGNDSLGDELLQLFPAPLLAGVTATCVALFVVGIAGNLLTMLVVSRFRELRTTTNLYLSSMAFSDLLI-FLCMPLDLVRLWQYRPWNFGDLLCKLFQFVSESCTYATVLTITALSVERYFAICFPLRAKVVVTKGRVKLVIFVIWAV-AFCSAGPIFVLVGVEHENGT-----DPWDTNECRPTEFAVRSGLLTVMVWVSSIFFFLP----VFCLTVLYSLIGRKLWRRRRGDAVVGASLRDQNHKQTVKMLAVVVFAFILCWLPFHVGRY--LFSKSFEPGSLEIAQISQYCNLVSFV-LFYLSAAINPILYNIMSKKYRVAVFRLLGFEPFSQRKLSTLKDESSRAWTESSINT |
| 3ZPQ Chain:A ((12-300)) | -------------------------------------------AGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFG-ATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIIS---------FYIPLLIMIFVALRVYREAKEQ------------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWL----------FVAFNWLGYANSAMNPIIY-CRSPDFRKAFKRLLA--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224854 for 1904 contacts (-118.1/contact) +
2D Compatibility (PS) -26522 + (NN) -8962 + (LL) 6224
1D Compatibility (HY) -29600 + (ID) 3850
Total energy: -287564.0 ( -151.03 by residue)
QMean score : 0.372
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