Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNECHYDKHMDFFYNRSNTDTVDDWTGTKLVIVLCVGTFFCLFIFFSNSLVIAAVIKNRKFHFPFYYLLANLAAADFFAGIAYVFLMFNTGPV-SKTLTV-NRWFLRQGLLDS-SLTASLTNLLVIAVERHMSIMR-MRVHSNLTKKRVTLLILLVWAIAIFMGAVP-TLGW---------NCLCNISACSSLAPIYSRSYLVFWT-VSNLMAFLIMVVVYLRIYVYVKRKTNVLSPHTSGSISRRRTPMKLMKTVMTVLGAFVVCWTPGLVV----LLLDGLNCRQCGVQHVKRWFLLLALLNSVVNPIIYSYKDEDMYGTMKKMICCFSQENPERRPSRIPSTVLSRSDTGSQYIEDSISQGAVCNKSTS |
| 4GBR Chain:A ((17-285)) | -----------------------------------------LAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVV--PFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFT---NQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKFC-------LKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKE--VYILLNW---IGYVNSGFNPLIYC-RSPDFRIAFQELLCL------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195433 for 1825 contacts (-107.1/contact) +
2D Compatibility (PS) -25730 + (NN) -9310 + (LL) 5152
1D Compatibility (HY) -27200 + (ID) 3950
Total energy: -256471.0 ( -140.53 by residue)
QMean score : 0.354
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