Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMVSVNSSHCFYNDSFKYTLYGCMFSMVFVLGLISNCVAIYIFICVLKVRNETTTYMINLAMSDLLFVFTL-PFRIFYFTTRNWPFGDLLCKISVMLFYTNMYGSILFLTCISVDRFLAIVYPFKSKTLRTKRNAKIVCTGVWLTVIGGSAPAVFVQ-----STHSQGNN--ASEACFENFPEATWKTYLSRIVIFIEIVGFFIPLILNVTCSSMVLKTLTKPVTLSRSKINKTKVLKMIFVHLIIFCFCFVPYNI----NLILYSLVRTQTFVNCSVVAAVRTMYPITLCIAVSNCCFDPIVYYFTSDTIQNSIKMKNWSVRRSDFRFSEVHGAENFIQHNLQTLKSKIFDNESAA
4LDL Chain:A ((186-452))--------------------GIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVW--IVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAY-------AIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ--KFALKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYV-------------NSGFNPLIYCRSPDFRIAFQELLCL-------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4LDL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -220827 for 1809 contacts (-122.1/contact) +
2D Compatibility (PS) -24713 + (NN) 4989 + (LL) 6284
1D Compatibility (HY) -25200 + (ID) 3400
Total energy: -262867.0 ( -145.31 by residue)
QMean score : 0.224

(partial model without unconserved sides chains):
PDB file : Tito_4LDL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LDL-query.scw
PDB file : Tito_Scwrl_4LDL.pdb: