Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNPFHASCWNTSAELLNKSWNKEFAYQTASVVDTVILPSMIGIICSTGLVGNILIVFTIIRSRK-KTVPDIYICNLAVADLV-HIVGMPFLIHQWARGGEWVFGGPLCTIITSLDTCNQFACSAIMTVMSVDRYFALVQPFRLTRWRTRYKTIRINLGLWAASFILA-LPVWVY------SKVIKFKDGVESCAFDLTSPDDVLWYTLYLTITTFFFPLPLILVCYILILCYTWEMYQQNKDARCCNPSVPKQRVM---KLTKMVLVLVVVFILSAAPYHVIQLVNLQMEQ--PTLAFYVGYYLSICLSYASSSINPFLYILLSGNFQ---KRLPQIQRRATEKEINNMGNTLKSHF |
2Y01 Chain:A ((3-300)) | ------------AELLSQQWEAGMSLLMALVVLLIV-------------AGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRG-TWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRA-----YAIASSIISFY--IPLLIMIFVALRVYREAKEQ------------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNW----LGYANSAMNPIIYC-RSPDFRKAFKRLLA--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213503 for 1892 contacts (-112.8/contact) +
2D Compatibility (PS) -26833 + (NN) -1404 + (LL) 3712
1D Compatibility (HY) -28400 + (ID) 4100
Total energy: -270528.0 ( -142.99 by residue)
QMean score : 0.282
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