Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPTISTLDTELTPINGTEETLCYKQTLSLTVLTCIVSLVGLTGNAVVLWLLGCRMR-RNAFSIYILNLAAADFLFLSGRLIYSLL---SFISIPHTISKILYPVMMFSYFAGLSFLSAVSTERCLSVLWPIWYRCHRPTHLSAVVCVLLWALSL---LRSILEWMLCGFLFSGADSAW--------CQTSDFITVAWLIFLCVVLCGSSLVLLI-----RILCGSRK---------IPLTRLYVTILLTVL----------VFLLCGLPFGI-QFFLFLWIHVDREVLFCHVHLVSIFLSALNSSANPIIYFFVGSFRQRQNRQNLKLVLQRALQDASEVDEGGGQLPEEILELSGSRLEQ |
| 3REY Chain:A ((16-305)) | ------------------------------------IAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAITISTGFCAACHGCLFIACFVLVLAQSSIFSLL-AIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLW--LMYLAIVLAHTNSVVNPFIY----AYRIREFRQTFRKIIRS----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3REY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212390 for 1748 contacts (-121.5/contact) +
2D Compatibility (PS) -24586 + (NN) -4496 + (LL) 4708
1D Compatibility (HY) -25600 + (ID) 3150
Total energy: -265514.0 ( -151.90 by residue)
QMean score : 0.253
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