Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNVIEFILLGLTHNPELQKFLFVMFLITYLITLAGNLFISVIIFISPALGSPMYSFPSYLFIIDIFCSSSIAPKMNFDLISEKNTISFNGCMTQLFTEHFFYYYYYYTLTEIILLSVMAYDHYVAIRKPLHYATIMSQPMCGFLMVVAGILGFVHGGIQTLFIAQLPFCGPNVINHFMCDLVPLLELACTDTHTLGPLIAANSGSLCFLIFSMLVASYVIILCFLRTHSS------------------------------------------------------------------------------------------------------------------------------------------------------------------EGRRKALSSCASHIFIVILFFVPFSYLYLRPT-S----FPTDKAVTVFCTLFTPMLNPLIYTLKNKEVKNVIKKLWKQIMTTDDK |
| 3RZE Chain:A ((9-443)) | -------------------MPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMDYV------ASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNH---------RREDKCETDFYDV---------TWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHI------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228192 for 1920 contacts (-118.8/contact) +
2D Compatibility (PS) -25880 + (NN) 403 + (LL) 3356
1D Compatibility (HY) -16800 + (ID) 2300
Total energy: -269413.0 ( -140.32 by residue)
QMean score : 0.240
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