Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLNKSASTFQLTGFPGMEKAHHWIFIPLLAAYISILLGNGTLLFLIRNDHNLHEPMYYFLAMLAATDLGVTLTTMP----TVLGVLWLDHREIGHGACFSQAYF-IHTLSVMES-GVLLAMAYDCFITIRSPLRYTSILTNTQVMKIGVRVLTRAGL-SIMPIVVRLHWFPYCRSHVLSHAFCLHQDVIKLACADITFNRLYPVVVLFAMVLLDFLIIFFSYILILKT----VMGIGSGGERA--------KALNTC-----VSHICCILVFYVTVVCLTFIHRFGKH-VPHVVHITMSYIHFLFPPFMNPFIYSIKTKQIQSGILRLFSLPHSRA |
| 2YCZ Chain:A ((25-299)) | -----------------------------------IVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWL------WGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIM--MHWW----RDEDPQALKCYQDP---GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIV-----NVFNRDLVPDWLFVAFNWLGYANSA-MNPIIYC-RSPDFRKAFKRLLAF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219028 for 1738 contacts (-126.0/contact) +
2D Compatibility (PS) -25254 + (NN) -4930 + (LL) 4660
1D Compatibility (HY) -27200 + (ID) 3500
Total energy: -275252.0 ( -158.37 by residue)
QMean score : 0.211
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