Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTVNHSGTSHTVFHLLGIPGLQDQHMWISIPFFISYVTALLGNSLLIFIILTKRSLHEPMYLFLCMLAGADIVLSTCTIPQALAIF----WFRAGDI-----SLD-RCITQLFFIHSTFISESGILLVMAFDHYIAICYPLRYTTILTNALIKK-ICVTVSLRSYGTIFPIIFLLKRLTFCQNNIIPHTFCEHIGLAKYACNDIRINIWYGF-SILMSTVVLDVVLIFISYMLILHAVFHMPSPDAC-HKALNTFGSHVCIIILFYGSGIFTILTQRFGRHIPPCIHIPLANVCILAPPMLNPIIYGIKTKQIQEQVVQFLFIKQK |
| 2VT4 Chain:A ((28-283)) | ------------------------------------------GNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVT----------ASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIM-----MHWWRDEDPQALKCYQ----DPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR-----EHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200004 for 1615 contacts (-123.8/contact) +
2D Compatibility (PS) -22807 + (NN) -2724 + (LL) 5232
1D Compatibility (HY) -21200 + (ID) 3200
Total energy: -244703.0 ( -151.52 by residue)
QMean score : 0.158
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