Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPSNITSTHPAVFLLVGIPGLEHLHAWISIPFCFAYTLALLGNCTLLFIIQADAALHEPMYLFLAMLATIDLVLSSTTLPKMLAIFWFRDQEINFFACLVQMFFLHSFSIMESAVLLAMAFDRYVAICKPLHYTTVLTGSLITKIGMAAVARAVTLMTPLPFLLRRFHYCR--GPVIAHCYCEHMAVVRLACGDTSFNNIYGIA---VAMFIVVLDLLFVILS-YVFILQAVLQLASQEAR-YKAFGTCVSHIGAILSTYTPVVISSVMHRVARHAAPRVHILLAIFYLLFP-PMVNPIIYGVKTKQIREYVLSLFQRKNM |
| 2VT4 Chain:A ((102-283)) | --------------------------------------------------------------------------------------------------------------------LCVIAIDRYLAITSPFRYQSLMTRAR-AKVIICTVWAISALVSFLPIMM---HWWRDEDPQALKCYQDP------GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR--------EHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPD-WLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129446 for 905 contacts (-143.0/contact) +
2D Compatibility (PS) -15963 + (NN) -2540 + (LL) 14040
1D Compatibility (HY) -16400 + (ID) 2300
Total energy: -152609.0 ( -168.63 by residue)
QMean score : 0.123
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