Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLDSFFSFLLKSLIMALSNSSWRLPQPSFFLVGIPGLEESQHWIALPLGILYLLALV-GNVTILFIIWMDPSLHQSMYLFLSMLAAIDLVVASSTAPKALAVLLVRAQEIGYTVCLIQMFFTH-----AFSSMESGVLVAMALDRYVAICHPLHHSTILHPG---VIGHIGMVVLVRGLLLLIPFLILLRKLIFCQATIIGHAYCEHMAVVKLACSETTVNRAYGLTVALLVVGLDVLAIGVSYAHILQAVLKVPGNEARL-----KAFSTCGSHVCVILVFYIPGMFSFLTHRFGHH-VPHHVHVLLAILYRLVPPALNPLVYRVKTQKIHQ |
| 4QKX Chain:A ((191-447)) | ---------------------------------------------------LIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAACILTKTWTFGNFWC---EFWTSIDVLCVTASIET--LCVIAVDRYFAITSPFKYQSLLTKNKARVI--ILMVWIVSGLTSFLPIQMHWYRATHQEAI---NCYAEE------TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ---KFALKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWI-GYVNSGFNPLIYCRSPDFRIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227367 for 1709 contacts (-133.0/contact) +
2D Compatibility (PS) -24328 + (NN) -10339 + (LL) 5428
1D Compatibility (HY) -23600 + (ID) 3250
Total energy: -283456.0 ( -165.86 by residue)
QMean score : 0.203
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