Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGIPGLEGLHTWISIPFSFMYIVAVAGNIFLIFLIMTERSLHEPMYLFLSMLASADFLLATAAAP----KVLAILWFHSMDISFGSCVSQMFFIHFIFVAESAI--LLAMAFDRYVAICYPLRYTILTSSAVRKIGIAAVVRSFFICCPFIFLVYRLTYCGRNIIPHS-YCEHIARLACGNINVNIIYGLTVALLSTGLDIVLIII----SYTMILHSVFQISSWAAR-FKALSTCGSHICVIFMFYTPAFFSFLAHRFGGKTIPHHIHILVGSLYVLVPPMLNPIIYGVKTKQIKDRVILLFSPISVC |
2VT4 Chain:A ((14-283)) | ------------MSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWL------WGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTV----WAISALVSFLPIMMHWWRDEDPQALKCYQDP--GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR--------EHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAM-NPIIYCRSPDFRKAFKRLLA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245716 for 1718 contacts (-143.0/contact) +
2D Compatibility (PS) -24753 + (NN) -4538 + (LL) 2768
1D Compatibility (HY) -21600 + (ID) 3050
Total energy: -296889.0 ( -172.81 by residue)
QMean score : 0.138
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