Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNWVNDSIIQEFILLGFSDRPWLEFPLLVVFLISYTVTIFG-NLTIILVSRLDTKLHTPMYFFLTNLSLLDLCYTTCTVPQMLVNLCSIRKVISYRGCVAQLFIFLALGATEYLLLAVMSFDRFVAICRPLHYSVIMHQRLCLQLAAASWVTGFSNSVWLSTLTLQLPLCDPYVIDHFLCEVPALLKLSCVETTANEAELFLVSELFHLIPLTLILISYAFIV----RAVLRIQSAEGRQKAFGTCGSHLIVVSLFY------STAVSVYLQPPSPSSKDQGKM---VSLFYGIIAPMLNPLIYTLRNKEVKEGFKRLVARVFLIKK |
1HZX Chain:A ((36-316)) | -------------------EPW-QFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-NFRFGENHAIMGVAFTWVMA------LACAAPPLVGWSRYIPEGMQCSC-GIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAA-----ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIF--THQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243583 for 2088 contacts (-116.7/contact) +
2D Compatibility (PS) -26244 + (NN) -1018 + (LL) 2200
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -273945.0 ( -131.20 by residue)
QMean score : 0.231
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