Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSDNHSFLGDSPKAFILLGVSDRPWLELPLFVVLLLSYVLAMLGNVAIILASRVDPQLHSPMYIFLSHLSFLDLCYTTTTVP--QMLVNMGSSQKTISYGGCTVQ-YAVFHWLGCTECI-VLAAMALDRYVAICKPLHYAVLMHRALCQQLVALAWLSGFGNSFVQVVLTVQLPFCGRQVLNNFFCEVPAVIKL----SCADTAVND--TILAVLVAFFV--LVPLALILLSYGFIARAVLRIQSSKGR--------HKAFGTCSSHLMIVSLFYLPAIYMYLQPPSSYSQE---QGKFISLFY-SIITPTLNPFTYTLRNKDMKGALRRLLARIWRLCG |
| 2Y03 Chain:A ((11-300)) | ---------------------------EAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRG----TWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPI------------MMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR--------SRVMLMREHKALKTLGIIMGVFTLCWLP--FFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218767 for 1825 contacts (-119.9/contact) +
2D Compatibility (PS) -26173 + (NN) -10438 + (LL) 3736
1D Compatibility (HY) -23600 + (ID) 3400
Total energy: -278642.0 ( -152.68 by residue)
QMean score : 0.236
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