Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKINNVTEFIFWGLSQSPEIEKVCFVVFSFFYIIILLGNLLIMLTVCLSNLFKSPMYFFLSFLSFVDICYSSVTAPKMIVDLLAKDKTISYVGCMLQLFGVHFFGCTEIFILTVMAYDRYVAICKPLHYMTIMNRETCNKMLLGTWVGGFLHSIIQVALVVQLPF---------------CGPNEIDHYFCDVHPVLKLACTETYIVGVVVTANSGTIALGSFVILLISYSIILVSLRKQSAEGRRKALST------CGSHIAMVVIFFGPC--------TFMYMRPDTTFSEDKM--VAVFYTIITPMLNPLIYTLRNAEVKNAMKKLWGRNVFLEAKGK |
4UG2 Chain:A ((18-309)) | ---------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIA--ISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSF-----AIGLTPMLGWNNCGQPKEGKAHSQGCGEGQVACLFEDVVP-MNYMVYFNFFACVLVPL---LLMLGVYLRIFLAARRQL-------------ARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -255938 for 1852 contacts (-138.2/contact) +
2D Compatibility (PS) -24836 + (NN) -4506 + (LL) 4772
1D Compatibility (HY) -25200 + (ID) 3050
Total energy: -308758.0 ( -166.72 by residue)
QMean score : 0.298
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