Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYSIYKSTVNIPLSHGVVHSFCHNMNCNFMHIFKFVLDFNMKNVTEVTLFVLKGFTDNLELQTIFFFLFLAIYLFTL--MG---NLGLILVVIRDSQLHKPMYYFLSMLSSVDACYSSVITPNMLVDFTTKNK-------VISFLGCVAQVFLACSFGTTECFLLAAMAYDRYVAIYNPLLYSVSMSPRVYMPLINASYVAGILHATIHTVATFSLSFCGANEIRRVFCDIPPLLAIS------------------YSDTHTNQLLLFYFVGSIELVTILIVLISYGLILLAILKMYSAEGRRKVFSTCGAHLTGVSI------------YYGTILFMYVRPSSSYASDHDMIVSIFYTIVIPLLNPVIYSLRNKDVKDSMKKMF--GKNQVINKVYFHTKK |
| 4BEZ Chain:A ((40-327)) | -------------------------------------------------------------------FSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFM-------VFGDFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPM----------------SNFRFGENHAIMGVAFTWVMALA---------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHF-IIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIF-MTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189356 for 1702 contacts (-111.3/contact) +
2D Compatibility (PS) -24713 + (NN) -6141 + (LL) 8332
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -213728.0 ( -125.57 by residue)
QMean score : 0.048
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