Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPSATPGAQMGVPPGSREPSPVPPDYEDEFLRYLWRDYLYPKQYE--WVLIAAYVAVFVVALVGNTLVCLAVWRNHHMRTVTNYFIVNLSLADVLVTAICLPASLLVDITESWLFGHALCKVIPYLQAVSVSVAVLTLSFIALDRWYAICHPLLFKSTARRARGSIL--GIWAVSLAIMVPQAAVMECSSVLPELANRTR------LFSVCDERWADDLYPKIYHSCFFIVTYLAPLGLMAMAYFQIFRKLWGRQIPGTTSALVRNWKRPSDQLGDLEQGLSGEPQPRARAFLAEVKQMRARRKTAKMLMVVLLVFALCYLPISVLNVLKRVFGMFRQASDREAVYACFTFSHWLVYANSAANPIIYNFLSGKFREQFKAAFSCCLPGLGPCGSLKAPSPRSSASHKSLSLQSRCSISKISEHVVLTSVTTVLP |
| 2YCZ Chain:A ((9-294)) | -------------------------------------------QWEAGMSLLMALVVLLIVA--GNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALV-----------SFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYRE-------------------AKEQIRKIDRA-----SKRKRVML-----MR-EHKALKTLGIIMGVFTLCWLPFFLVNIV----NVFNRDLVPDWLFVAF---NWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF-------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -224127 for 2031 contacts (-110.4/contact) +
2D Compatibility (PS) -28694 + (NN) -13179 + (LL) 7676
1D Compatibility (HY) -32400 + (ID) 4650
Total energy: -295374.0 ( -145.43 by residue)
QMean score : 0.325
|
|
|