Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQAVDNLTSAPGNTSLCTRDYKITQVLFPLLYTVLFFVGLITNGLAM-RIFFQIRSKSNFIIFLKNTVISDLLMILTFPF---KILSDAKLGTGPLRTFVCQVTSVIFYFTMYISISFLGLITIDRYQKTT----RPFKTSNPKNLLGAKILSVVIWAFMFLLSLPNMILTNRQPRDKNVKKCSFLKSEFGLVWHEIVNYICQV-IFWINFLIVIVCYTLITKELYRSYVRTRGVGKVPRKKVNVKVFIIIAVFFICFVPFHFARIPYTLSQTRDV-FDCTAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLISMLKCPNSATSLSQDNRKKEQDGGDPNEETPM |
| 4XT1 Chain:A ((47-315)) | ------------------------------LYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLD-----SVP-----CTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVKQ--------ACLFSIFWWIFAVIIAIPHFMVVTKKD-NQCMTDYDYLEVSYPI----ILNVELMLGAFVIPLSVISYCYYRISRIVAVS--QSRHKGRIVRVLIAV-----VLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203007 for 1853 contacts (-109.6/contact) +
2D Compatibility (PS) -25316 + (NN) -240 + (LL) 4272
1D Compatibility (HY) -32000 + (ID) 3500
Total energy: -259791.0 ( -140.20 by residue)
QMean score : 0.231
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