Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPHDSSHMDSEFRYTLFPIVYSIIFVLGVIANGYVLWVFARLYPCKKFNEIKIFMVNLTMADMLFLITLPLWIVYYQNQ----GNWILPKFLCNVAGCLFFINTYCSVAFLGVITYNRFQAVTRPIKTAQANTRKRGISLSLVIWVAIVGAASYFLILDSTNTVPDSAGSGNVTRCFEHYEKGS---VPVLIIHIFIVFSFFLVFLIILFCNLVIIR-----TLLMQPVQQQRNAEVKRRALWMVCTVLAVFIICFVPHHVVQLPWTLAE-LGFQDSKFHQAINDAHQVTLCLLSTNCVLDPVIYCFLTKKFRKHLTEKFYSMRSSRKCSRATTDTVTEVVVPFNQIPGNSLKN |
| 4EA3 Chain:A ((131-401)) | --------------------LYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIF--NLALADTLVLLTLP-----FQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIW-ALASVVGVPVAIMGSAQVEDEE-----IECLVEIPTPQDYWGPVFAICIFL-FSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNL---RRITRLVLVVVAVFVGCWTPVQV----FVLAQGLGVQPSS-ETAVAILRFCT-ALGYVNSCLNPILYAFLDENFKACFR------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247223 for 1864 contacts (-132.6/contact) +
2D Compatibility (PS) -25637 + (NN) -7254 + (LL) 6328
1D Compatibility (HY) -24800 + (ID) 4050
Total energy: -302636.0 ( -162.36 by residue)
QMean score : 0.297
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