Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESGLLRPAPVSEVIVLHYNYTGKLRGARYQPGAGLRADAVVCLAVCAFIVLENLAVLLVLGRHPRFHAPMFLLLGSLTLSDL-LAGAAYAANILLS-------GPLTLKLSPALWFAREGGVFVALTASVLSLLAIALERSLTMARRGPAPVSSRGRTLAMAAAAWGVSLLLGLLPALGW--------NCLGRLDACSTVLPLYAKAYVLFC-VLAFVGILAAICALYARIYCQVRANARRLPARPGTAGTTSTRARRKPRSLALLRTLSVVLLAFVACWGPL----FLLLLLDVACPARTCPVLLQADPFLGLAMANSLLNPIIYTLTNRDLRHALLRLVCCGRHSCGRDPSGSQQSASAAEASGGLRRCLPPGLDGSFSGSERSSPQRDGLDTSGSTGSPGAPTAARTLVSEPAAD |
| 3C9M Chain:A ((55-327)) | -----------------------------------------------------NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEG--FFATLGG-----EIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQ-----QQESATTQKAEKE-----VTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFG---PIFMTIPAFF--AKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNP----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145107 for 2088 contacts (-69.5/contact) +
2D Compatibility (PS) -26562 + (NN) -17191 + (LL) 6428
1D Compatibility (HY) -26800 + (ID) 3000
Total energy: -212232.0 ( -101.64 by residue)
QMean score : 0.384
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