Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSCSTVYNTLMPCLGYVQS----GGV------VPRACCGGIKKLVSTARSTPDRRSICTCLKNVGSGAAG--G---------P-----Y----VSRAAGLPGKCKVPLPFNCNSN
1B1U Chain:A ((15-108))
--------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38278 for 398 contacts (-96.2/contact) +
2D Compatibility (PS) -6432 + (NN) -1894 + (LL) 920
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -49084.0 ( -123.33 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: