Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVANCGQVVSYLAPCISYAMGRVSVPGGGCCSGVRGLNAAAATPADRKATCTCLKQQASGMGGIKPDLVAGIPSKCGVNIPYAISPRTDCSKVR
1AFH Chain:A ((1-93))
-AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69267 for 764 contacts (-90.7/contact) +
2D Compatibility (PS) -9270 + (NN) 906 + (LL) 144
1D Compatibility (HY) -6000 + (ID) 2800
Total energy: -86287.0 ( -112.94 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: