Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------AVSCGDVTSSIAPCLSYVMGRESSPSSSC---CSGVRTLNGKAS-----------SSADRRTACSCLKNMASSF-----RNLNMGNAASIPSKCGVSVAFPISTSVDCSKIN-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA------GSVVDALRAVR--NAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAE-TGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21463 for 409 contacts (-52.5/contact) +
2D Compatibility (PS) -8822 + (NN) -2622 + (LL) 152
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -35905.0 ( -87.79 by residue)
QMean score : 0.348
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