Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCNALQLTPCAGAIVGNAAPTASCCSKMKEQQPCMCQYARDPNLKQYVDSPNG---KKVMAACKVPVPSC
3ZR8 Chain:X ((1-65))
GPTEKAAVKKMAKAIMADPSKADDVYQKWADKG------YTLTQLSDFLKSKTRGKYDRVYNGYMTYRDYV
General information:
TITO was launched using:
RESULT:
Template:
3ZR8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22956 for 364 contacts (-63.1/contact) +
2D Compatibility (PS) -6472 + (NN) -3767 + (LL) 392
1D Compatibility (HY) -4000 + (ID) 350
Total energy: -37153.0 ( -102.07 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_3ZR8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZR8-query.scw
PDB file :
Tito_Scwrl_3ZR8.pdb
: