Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCDALQLSPCAGAIVGNAAPTAVCCSRM------KAQRPCMCQ------------------YARDPNLKQYVNS--PNGKKVLAACKVPVPSC
1MOL Chain:A ((1-94))
GEWEIIDIGPFTQNLGKFAVDEENKIGQYGRLTFNKVIRPCMKKTIYENEREIKGYEYQLYVYASDKLFRADISEDYKTRGRKLLRFNGPVPPP
General information:
TITO was launched using:
RESULT:
Template:
1MOL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19309 for 361 contacts (-53.5/contact) +
2D Compatibility (PS) -6881 + (NN) 2434 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -27256.0 ( -75.50 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_1MOL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MOL-query.scw
PDB file :
Tito_Scwrl_1MOL.pdb
: