Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------AGCNPSALSPCMSAIMLGAAPSPGCCVQLRAQQPCLCQYARDPSYRSYVTSPSAQRAVKACNVKANC----------------------------------------- |
| 4CHE Chain:A ((8-167)) | HTMKIRSTKFSILNSDHPRIEVKKVFSLSPDVQVTIPYRRFKGKAKVYFQNDQIQGYFSCTDRQIDEIKISAPKNAPLLEPLLDICYYGSFIEPGF----------------EQTFGFY---PAGKREFVDSFFMHHSKDHKAFLIHMGLDKDLSLPLSPELNWKEPALSKVCRVTELD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CHE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6328 for 243 contacts (-26.0/contact) +
2D Compatibility (PS) -5416 + (NN) -7430 + (LL) 1848
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -21026.0 ( -86.53 by residue)
QMean score : 0.178
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