Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCNAGQLAICAGAII---GGSTPSASCCSNLRAQRGCFCQYARNPAYASYINSANARKTLTSCGIAIPRC
2LBF Chain:A ((1-69))
MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPA-
General information:
TITO was launched using:
RESULT:
Template:
2LBF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24084 for 422 contacts (-57.1/contact) +
2D Compatibility (PS) -7261 + (NN) -2574 + (LL) 56
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -36813.0 ( -87.23 by residue)
QMean score : 0.278
(partial model without unconserved sides chains):
PDB file :
Tito_2LBF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LBF-query.scw
PDB file :
Tito_Scwrl_2LBF.pdb
: