Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--AVVPPSRCNPTLLTPCAGPA------LFGGPVPPACCAQLR---AQAACLCAYARSPNYGSYIRSPNARRLFAVCGLPMPQCS
2LU7 Chain:A ((1-82))
MTRVRSTPGGDLELVVHLSGPGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQDSRIFLVSVEEP---
General information:
TITO was launched using:
RESULT:
Template:
2LU7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32910 for 406 contacts (-81.1/contact) +
2D Compatibility (PS) -7628 + (NN) -3630 + (LL) 148
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -45920.0 ( -113.10 by residue)
QMean score : 0.088
(partial model without unconserved sides chains):
PDB file :
Tito_2LU7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LU7-query.scw
PDB file :
Tito_Scwrl_2LU7.pdb
: