Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPPLGTCGAQL---SQLAPCARYSVPPLP--GQALP-----TPGPECCSALGSVSRDCACGAID-----------------IINSLPAKCGLPRVSCQ
1S6D Chain:A ((10-102))
-----GCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQPCQ
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41595 for 410 contacts (-101.5/contact) +
2D Compatibility (PS) -6724 + (NN) -1670 + (LL) -156
1D Compatibility (HY) -6400 + (ID) 1050
Total energy: -57595.0 ( -140.48 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: