Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTLGK--SPSCLCAVMLSGTAKMAGIKPEVAITI-PKRCNMADRPVGYKCGDYTLP
1HYP Chain:A ((10-79))
----------------DLSICLNILGGSLGT-VDDCCALIGGLGDIEAIVCLCIQLRA---LGI-LNLNRNLQLILNSCGR-SYPSNATCPR----
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38421 for 416 contacts (-92.4/contact) +
2D Compatibility (PS) -6674 + (NN) -1181 + (LL) 384
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -50042.0 ( -120.29 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: