Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APAGTTCEQLESVARSCTGYLKRSLIFLNDACCDGAESVYDALTTDAAVDLGFVCRCLRGFVISESLRPYL--YRVANLPRLCRFKDRGPIPYNNSTIHDCRFSGTTRHSL
1N89 Chain:A ((9-62))
---------------VCASAILSGA-KPSGECCGNLRAQ----------Q---GCFCQY--AKDPTYGQYIRSPHARDTLTSCGL--------------------------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28096 for 288 contacts (-97.6/contact) +
2D Compatibility (PS) -5092 + (NN) 3148 + (LL) 2644
1D Compatibility (HY) 800 + (ID) 350
Total energy: -26946.0 ( -93.56 by residue)
QMean score : 0.066
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: