Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SLTCPQIKGNLTPCVLYLKN---GGV----LPPSCCKGVRAVNDASRTTSDRQSACNCLKDTAKGIA-------G----LNPNLAAGLPGKCGVNIPYKISPSTNCNNVK
1HSS Chain:A ((15-105))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVV------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41724 for 404 contacts (-103.3/contact) +
2D Compatibility (PS) -6616 + (NN) -1692 + (LL) 840
1D Compatibility (HY) -5200 + (ID) 600
Total energy: -54992.0 ( -136.12 by residue)
QMean score : 0.349
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: