Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------QQIQDFIDCLNVIIYFSSCIGYIDGHVREPTWGC----CMGVHELNRLVK-----------QDRDAQKICQCIELIAAVDD----PPFVLANIDALPSKCQTHLSFPISVKKNCSEVQ---------- |
| 1O4U Chain:A ((1-273)) | MEKILDLLMSFVKEDEGKLDLASFPLRNTTAGAHLLLKTENVVASGIEVSRMFLEKMGLLSKFNVEDGEYLEGTGVIGEIEGNTYKLLVAERTLLNVLSVMFSVATTTRRFAEKLKHAKIAATRKILPGLGVLQKIAVVHGGGDCVMIKDNHLKMYGSAERAVQEVR---------KIIPFTTKIEVEVENLEDALRAVEAGADIVMLDNLSPEEVKDISRRIKDINPNVIVEVSGGITEENVSLY-DFETVDV---ISSSRLTLQEVFVDLSLEIQR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1O4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -19855 for 449 contacts (-44.2/contact) +
2D Compatibility (PS) -8772 + (NN) -2201 + (LL) -24
1D Compatibility (HY) 2800 + (ID) 450
Total energy: -28502.0 ( -63.48 by residue)
QMean score : 0.296
|
|
|