Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGTVASSLAPCAGYLTKGGAVPAPCCAGVSKLNGMAKTTPDRQQACKCLKAAAQ---SINPSLASGLPGKCGVSIPYPISMSTNCDNVK
1BWO Chain:A ((1-90))
-IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV-
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52719 for 598 contacts (-88.2/contact) +
2D Compatibility (PS) -9005 + (NN) -2319 + (LL) 208
1D Compatibility (HY) -8400 + (ID) 1850
Total energy: -74085.0 ( -123.89 by residue)
QMean score : 0.396
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: