Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVASSLAPCISYLQK----GGVP----------SASCCSGVKALNSAASTTADRKTACNCLKNLAGP-K------SG----INEGNAASLPGKCKVIVPYWISTFTNCANIK
2LVF Chain:A ((16-101))
-------QMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM--------DESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPSRCNLS---------------
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15291 for 335 contacts (-45.6/contact) +
2D Compatibility (PS) -6170 + (NN) -256 + (LL) 2016
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -24701.0 ( -73.73 by residue)
QMean score : 0.420
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: