Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITC--GQV--ASSLTSCIPFITK---GGIVPP----SCCAGVKSLNAAAKTTPDRQAVCNCLKSEAGRI-------GGFN----ANNAAILPGKCGVSIPYKISTSTNCASIKF--------
1HSS Chain:A ((5-124))
-MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV--VDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49708 for 511 contacts (-97.3/contact) +
2D Compatibility (PS) -8316 + (NN) -2331 + (LL) 740
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -65415.0 ( -128.01 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: