Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceACNPSELMACAS-------SILQSKPPTAQCCAKLKEQ------QPCFCQYKKDP----------SLKGYINPANFKKVAACRVQVPKC
1VD2 Chain:A ((11-99))GPLGSQVRVKAYYRGDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYELNKDSELLIHVFPC


General information:
TITO was launched using:
RESULT:

Template: 1VD2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21045 for 359 contacts (-58.6/contact) +
2D Compatibility (PS) -7087 + (NN) -1386 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 400
Total energy: -33118.0 ( -92.25 by residue)
QMean score : 0.351

(partial model without unconserved sides chains):
PDB file : Tito_1VD2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VD2-query.scw
PDB file : Tito_Scwrl_1VD2.pdb: