Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTSPSQCKEERNLLVNACRPVIYGRSPSADCCQRVRVS-H---VECVCPYVTPKTASIIGVIGVDNV-VKKIEGCGRTVPRKFKCGSITTP
1HYP Chain:A ((25-80))
---------------------------VDDCCALIGGLGDIEAIVCLCIQLRA----L-GILNLNRNLQLILNSCGRSYPSNATCPRT---
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18382 for 262 contacts (-70.2/contact) +
2D Compatibility (PS) -4987 + (NN) 823 + (LL) 1520
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -25576.0 ( -97.62 by residue)
QMean score : 0.211
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: