Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGTVVSKLAPCLGFLRGGGS-PPPACCSGIRNLQSMARSTPDRQAACGCLKSASA---GVNMRNAAALPGKCGVNIGYPISRSVDCSRVK
1AFH Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57855 for 726 contacts (-79.7/contact) +
2D Compatibility (PS) -9310 + (NN) -1123 + (LL) 0
1D Compatibility (HY) -7200 + (ID) 2700
Total energy: -78188.0 ( -107.70 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: