Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTCSSVTKQLTPCLSYLTSGGAPTAACCGGVKSLNGMASMSTPDRQATCNCLKAAS---KGINLQNAVSLPAKCGVKIGYSISPNTDCSKVR
2ALG Chain:A ((1-92))
MITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLA-RTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATVK
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42224 for 607 contacts (-69.6/contact) +
2D Compatibility (PS) -9112 + (NN) -1011 + (LL) -28
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -63425.0 ( -104.49 by residue)
QMean score : 0.281
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: