Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPQQSCTASL---TGLNVCAPFLVPGSP-------T-----ASTECCNAVQSINHDCMCNTMR-----------------IAAQIPAQCNLPPLSCSAN
1S6D Chain:A ((10-102))
----GCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQPCQ--
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49177 for 395 contacts (-124.5/contact) +
2D Compatibility (PS) -6386 + (NN) -3150 + (LL) 284
1D Compatibility (HY) -7200 + (ID) 800
Total energy: -66429.0 ( -168.17 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: