Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGACGKSSPDSQALKLIPCATAASDKN------AA---VSSSCCLQVKKIIQNPSCLCAVVLS---NMAKF------------SG----V-N-PEIAITIPERCNFADRPVGFKCGAYTLP
1B1U Chain:A ((16-110))
--------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG----------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38761 for 393 contacts (-98.6/contact) +
2D Compatibility (PS) -6465 + (NN) -2497 + (LL) 760
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -50163.0 ( -127.64 by residue)
QMean score : 0.301
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: