Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPPDTVALRLAPCASAAEDPGSAPSGSCCSAVHAIGK---Q----SPRCLCAVMLSNTARSA-GIKAEVAITIPKRCNLADR-PVGYKCGDYTLP
1BWO Chain:A ((2-82))
-------DCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIA---RGIHNLNEDNARSIPPKCGVNLPYTIS---------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32058 for 467 contacts (-68.6/contact) +
2D Compatibility (PS) -7488 + (NN) -4288 + (LL) 244
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -48040.0 ( -102.87 by residue)
QMean score : 0.328
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: