Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIRSAAASLSPCLSAAGNVRAAVPPTCCSKVGSLIKT-APKCLCAVLLSPLAKQAGIKPGIAITI-PKRCNIGNRPAGKKCGSK
1HYP Chain:A ((10-80))
--------------DLSICLNILGGSLGT-VDDCCALIGGLGDIEAIVCLCIQLRA---LGI-LNLNRNLQLILNSCGR-SYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26533 for 428 contacts (-62.0/contact) +
2D Compatibility (PS) -6676 + (NN) 923 + (LL) 672
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -36464.0 ( -85.20 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: